Protein–RNA interactions for Protein: O94876

TMCC1, Transmembrane and coiled-coil domains protein 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1O94876 AC006058.4-201ENST00000624016 1670 ntBASIC16.05■□□□□ 0.16
TMCC1O94876 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.05■□□□□ 0.16
TMCC1O94876 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
TMCC1O94876 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TMCC1O94876 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMCC1O94876 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.04■□□□□ 0.16
TMCC1O94876 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.04■□□□□ 0.16
TMCC1O94876 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.04■□□□□ 0.16
TMCC1O94876 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 AC015922.1-201ENST00000421102 1152 ntBASIC16.04■□□□□ 0.16
TMCC1O94876 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.04■□□□□ 0.16
TMCC1O94876 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.04■□□□□ 0.16
TMCC1O94876 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.04■□□□□ 0.16
TMCC1O94876 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.04■□□□□ 0.16
TMCC1O94876 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.04■□□□□ 0.16
TMCC1O94876 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMCC1O94876 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.03■□□□□ 0.16
TMCC1O94876 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.03■□□□□ 0.16
TMCC1O94876 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.03■□□□□ 0.16
TMCC1O94876 TPRX2P-201ENST00000535362 881 ntBASIC16.03■□□□□ 0.16
TMCC1O94876 AC023310.3-201ENST00000557027 670 ntBASIC16.03■□□□□ 0.16
TMCC1O94876 AC100756.1-201ENST00000562736 682 ntBASIC16.03■□□□□ 0.16
TMCC1O94876 AC138749.3-201ENST00000567691 622 ntBASIC16.03■□□□□ 0.16
TMCC1O94876 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.03■□□□□ 0.16
TMCC1O94876 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.03■□□□□ 0.16
TMCC1O94876 AL132655.2-201ENST00000596276 594 ntBASIC16.03■□□□□ 0.16
TMCC1O94876 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 AC116165.1-201ENST00000611806 668 ntBASIC16.03■□□□□ 0.16
TMCC1O94876 TNRC18P2-201ENST00000417666 2714 ntBASIC16.03■□□□□ 0.16
TMCC1O94876 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TMCC1O94876 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.03■□□□□ 0.16
TMCC1O94876 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.03■□□□□ 0.16
TMCC1O94876 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
TMCC1O94876 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.03■□□□□ 0.16
TMCC1O94876 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.03■□□□□ 0.16
TMCC1O94876 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.03■□□□□ 0.16
TMCC1O94876 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMCC1O94876 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms