Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRIM3O75382 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TRIM3O75382 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.59□□□□□ -0.07
TRIM3O75382 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRIM3O75382 AC112504.1-201ENST00000623415 1841 ntBASIC14.59□□□□□ -0.07
TRIM3O75382 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM3O75382 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
TRIM3O75382 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.59□□□□□ -0.07
TRIM3O75382 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.59□□□□□ -0.07
TRIM3O75382 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TRIM3O75382 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRIM3O75382 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.59□□□□□ -0.07
TRIM3O75382 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRIM3O75382 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRIM3O75382 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM3O75382 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM3O75382 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM3O75382 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM3O75382 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM3O75382 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRIM3O75382 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM3O75382 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 PCDHA3-202ENST00000532566 4594 ntBASIC14.58□□□□□ -0.08
TRIM3O75382 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM3O75382 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TRIM3O75382 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRIM3O75382 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.58□□□□□ -0.08
TRIM3O75382 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.58□□□□□ -0.08
TRIM3O75382 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRIM3O75382 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.58□□□□□ -0.08
TRIM3O75382 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.58□□□□□ -0.08
TRIM3O75382 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.58□□□□□ -0.08
TRIM3O75382 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.58□□□□□ -0.08
TRIM3O75382 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.58□□□□□ -0.08
TRIM3O75382 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRIM3O75382 AC104581.4-201ENST00000623126 3052 ntBASIC14.58□□□□□ -0.08
TRIM3O75382 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
TRIM3O75382 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TRIM3O75382 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.58□□□□□ -0.08
TRIM3O75382 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TRIM3O75382 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRIM3O75382 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM3O75382 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM3O75382 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRIM3O75382 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
TRIM3O75382 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM3O75382 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRIM3O75382 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRIM3O75382 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.57□□□□□ -0.08
TRIM3O75382 AC114501.2-201ENST00000439631 535 ntBASIC14.57□□□□□ -0.08
TRIM3O75382 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.57□□□□□ -0.08
TRIM3O75382 SPTLC1P1-201ENST00000447199 261 ntBASIC14.57□□□□□ -0.08
TRIM3O75382 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.57□□□□□ -0.08
TRIM3O75382 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM3O75382 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRIM3O75382 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.57□□□□□ -0.08
TRIM3O75382 AC135586.1-201ENST00000539323 574 ntBASIC14.57□□□□□ -0.08
TRIM3O75382 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.57□□□□□ -0.08
TRIM3O75382 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms