Protein–RNA interactions for Protein: O60423

ATP8B3, Phospholipid-transporting ATPase IK, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8B3O60423 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 SPDYE18-201ENST00000510091 1050 ntBASIC16.78■□□□□ 0.28
ATP8B3O60423 SLED1-202ENST00000512051 380 ntBASIC16.78■□□□□ 0.28
ATP8B3O60423 AC055876.2-201ENST00000531834 546 ntBASIC16.78■□□□□ 0.28
ATP8B3O60423 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATP8B3O60423 AC190387.1-201ENST00000551683 408 ntBASIC16.78■□□□□ 0.28
ATP8B3O60423 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP8B3O60423 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
ATP8B3O60423 AC027307.3-201ENST00000594262 1100 ntBASIC16.78■□□□□ 0.28
ATP8B3O60423 LINC02084-201ENST00000606069 1096 ntBASIC16.78■□□□□ 0.28
ATP8B3O60423 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP8B3O60423 AC091951.1-201ENST00000512854 2465 ntBASIC16.78■□□□□ 0.28
ATP8B3O60423 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP8B3O60423 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
ATP8B3O60423 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP8B3O60423 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP8B3O60423 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP8B3O60423 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP8B3O60423 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP8B3O60423 CICP23-201ENST00000605013 2741 ntBASIC16.78■□□□□ 0.28
ATP8B3O60423 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP8B3O60423 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP8B3O60423 AL391825.1-201ENST00000457671 1364 ntBASIC16.77■□□□□ 0.28
ATP8B3O60423 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP8B3O60423 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP8B3O60423 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP8B3O60423 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
ATP8B3O60423 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ATP8B3O60423 AC087499.6-201ENST00000411576 835 ntBASIC16.77■□□□□ 0.28
ATP8B3O60423 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP8B3O60423 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP8B3O60423 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP8B3O60423 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP8B3O60423 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP8B3O60423 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.77■□□□□ 0.28
ATP8B3O60423 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP8B3O60423 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.77■□□□□ 0.28
ATP8B3O60423 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP8B3O60423 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP8B3O60423 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ATP8B3O60423 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP8B3O60423 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP8B3O60423 AP003680.1-201ENST00000598970 3660 ntBASIC16.77■□□□□ 0.28
ATP8B3O60423 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP8B3O60423 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
ATP8B3O60423 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATP8B3O60423 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP8B3O60423 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATP8B3O60423 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP8B3O60423 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.77■□□□□ 0.27
ATP8B3O60423 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.77■□□□□ 0.27
ATP8B3O60423 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP8B3O60423 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP8B3O60423 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.77■□□□□ 0.27
ATP8B3O60423 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP8B3O60423 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
ATP8B3O60423 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP8B3O60423 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP8B3O60423 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
ATP8B3O60423 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP8B3O60423 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP8B3O60423 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP8B3O60423 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ATP8B3O60423 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP8B3O60423 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
ATP8B3O60423 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
ATP8B3O60423 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP8B3O60423 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP8B3O60423 CRB3P1-201ENST00000449338 276 ntBASIC16.76■□□□□ 0.27
ATP8B3O60423 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP8B3O60423 MEIS3P1-201ENST00000495167 958 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms