Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SSSCA1O60232 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.76□□□□□ -0.37
SSSCA1O60232 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSSCA1O60232 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SSSCA1O60232 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SSSCA1O60232 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSSCA1O60232 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.76□□□□□ -0.37
SSSCA1O60232 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSSCA1O60232 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSSCA1O60232 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSSCA1O60232 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SSSCA1O60232 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.75□□□□□ -0.37
SSSCA1O60232 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SSSCA1O60232 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 AC079781.5-202ENST00000641784 3743 ntBASIC12.75□□□□□ -0.37
SSSCA1O60232 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SSSCA1O60232 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.75□□□□□ -0.37
SSSCA1O60232 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.75□□□□□ -0.37
SSSCA1O60232 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.75□□□□□ -0.37
SSSCA1O60232 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.75□□□□□ -0.37
SSSCA1O60232 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.75□□□□□ -0.37
SSSCA1O60232 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 KRT18P21-201ENST00000515767 1272 ntBASIC12.75□□□□□ -0.37
SSSCA1O60232 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 AC105339.3-201ENST00000560043 636 ntBASIC12.75□□□□□ -0.37
SSSCA1O60232 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 WASH3P-207ENST00000560956 1394 ntBASIC12.75□□□□□ -0.37
SSSCA1O60232 AC091304.2-201ENST00000564639 760 ntBASIC12.75□□□□□ -0.37
SSSCA1O60232 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 AP002414.3-201ENST00000589352 1468 ntBASIC12.75□□□□□ -0.37
SSSCA1O60232 CLEC4GP1-201ENST00000596555 870 ntBASIC12.75□□□□□ -0.37
SSSCA1O60232 FO538757.1-201ENST00000623083 1397 ntBASIC12.75□□□□□ -0.37
SSSCA1O60232 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.75□□□□□ -0.37
SSSCA1O60232 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.75□□□□□ -0.37
SSSCA1O60232 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.75□□□□□ -0.37
SSSCA1O60232 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSSCA1O60232 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SSSCA1O60232 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.74□□□□□ -0.37
SSSCA1O60232 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.74□□□□□ -0.37
SSSCA1O60232 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.74□□□□□ -0.37
SSSCA1O60232 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SSSCA1O60232 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SSSCA1O60232 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 AKR1C7P-201ENST00000305623 895 ntBASIC12.74□□□□□ -0.37
SSSCA1O60232 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.74□□□□□ -0.37
SSSCA1O60232 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SSSCA1O60232 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.74□□□□□ -0.37
SSSCA1O60232 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.74□□□□□ -0.37
SSSCA1O60232 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SSSCA1O60232 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
SSSCA1O60232 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.74□□□□□ -0.37
SSSCA1O60232 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.74□□□□□ -0.37
SSSCA1O60232 MIR3652-201ENST00000579335 131 ntBASIC12.74□□□□□ -0.37
SSSCA1O60232 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.74□□□□□ -0.37
SSSCA1O60232 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSSCA1O60232 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.74□□□□□ -0.37
SSSCA1O60232 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms