Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DUX1O43812 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
DUX1O43812 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DUX1O43812 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DUX1O43812 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
DUX1O43812 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.83□□□□□ -0.03
DUX1O43812 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.83□□□□□ -0.03
DUX1O43812 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.83□□□□□ -0.03
DUX1O43812 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DUX1O43812 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
DUX1O43812 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DUX1O43812 AL118508.1-201ENST00000613502 2345 ntBASIC14.83□□□□□ -0.03
DUX1O43812 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
DUX1O43812 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.03
DUX1O43812 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
DUX1O43812 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DUX1O43812 AL133338.1-201ENST00000565695 1517 ntBASIC14.83□□□□□ -0.04
DUX1O43812 AC010491.1-201ENST00000563101 2797 ntBASIC14.83□□□□□ -0.04
DUX1O43812 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.83□□□□□ -0.04
DUX1O43812 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.83□□□□□ -0.04
DUX1O43812 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 AL645937.2-201ENST00000396808 931 ntBASIC14.83□□□□□ -0.04
DUX1O43812 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.83□□□□□ -0.04
DUX1O43812 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.83□□□□□ -0.04
DUX1O43812 AC026954.1-201ENST00000429771 1293 ntBASIC14.83□□□□□ -0.04
DUX1O43812 FAM197Y7-201ENST00000432892 766 ntBASIC14.83□□□□□ -0.04
DUX1O43812 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.83□□□□□ -0.04
DUX1O43812 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
DUX1O43812 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.83□□□□□ -0.04
DUX1O43812 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.83□□□□□ -0.04
DUX1O43812 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.83□□□□□ -0.04
DUX1O43812 AC132938.4-201ENST00000623835 848 ntBASIC14.83□□□□□ -0.04
DUX1O43812 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.83□□□□□ -0.04
DUX1O43812 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.83□□□□□ -0.04
DUX1O43812 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.83□□□□□ -0.04
DUX1O43812 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.83□□□□□ -0.04
DUX1O43812 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
DUX1O43812 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DUX1O43812 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.82□□□□□ -0.04
DUX1O43812 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 LRRC59-203ENST00000576448 1531 ntBASIC14.82□□□□□ -0.04
DUX1O43812 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
DUX1O43812 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 AC022188.1-201ENST00000620960 1664 ntBASIC14.82□□□□□ -0.04
DUX1O43812 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
DUX1O43812 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.82□□□□□ -0.04
DUX1O43812 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
DUX1O43812 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
DUX1O43812 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.82□□□□□ -0.04
DUX1O43812 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
DUX1O43812 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX1O43812 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
DUX1O43812 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.82□□□□□ -0.04
DUX1O43812 AL513523.2-202ENST00000427283 2040 ntBASIC14.82□□□□□ -0.04
DUX1O43812 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms