Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TO15178 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TO15178 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TO15178 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.33□□□□□ -0.11
TO15178 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TO15178 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TO15178 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TO15178 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
TO15178 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.33□□□□□ -0.11
TO15178 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TO15178 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TO15178 AC112693.3-201ENST00000624819 1983 ntBASIC14.33□□□□□ -0.12
TO15178 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TO15178 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
TO15178 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.33□□□□□ -0.12
TO15178 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.33□□□□□ -0.12
TO15178 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 CRB3P1-201ENST00000449338 276 ntBASIC14.33□□□□□ -0.12
TO15178 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.33□□□□□ -0.12
TO15178 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.33□□□□□ -0.12
TO15178 AC123567.1-201ENST00000548294 1261 ntBASIC14.33□□□□□ -0.12
TO15178 TP53TG3HP-202ENST00000569755 579 ntBASIC14.33□□□□□ -0.12
TO15178 AC140912.1-201ENST00000577171 1054 ntBASIC14.33□□□□□ -0.12
TO15178 SPDYE22P-201ENST00000582158 798 ntBASIC14.33□□□□□ -0.12
TO15178 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.33□□□□□ -0.12
TO15178 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.33□□□□□ -0.12
TO15178 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.33□□□□□ -0.12
TO15178 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.33□□□□□ -0.12
TO15178 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.33□□□□□ -0.12
TO15178 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.33□□□□□ -0.12
TO15178 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.33□□□□□ -0.12
TO15178 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.33□□□□□ -0.12
TO15178 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.33□□□□□ -0.12
TO15178 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.33□□□□□ -0.12
TO15178 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TO15178 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.33□□□□□ -0.12
TO15178 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.33□□□□□ -0.12
TO15178 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.33□□□□□ -0.12
TO15178 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 KRT8P44-201ENST00000441609 1350 ntBASIC14.33□□□□□ -0.12
TO15178 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TO15178 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TO15178 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TO15178 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.32□□□□□ -0.12
TO15178 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.32□□□□□ -0.12
TO15178 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TO15178 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TO15178 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TO15178 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms