Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP2A1O14983 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 AHCYP2-201ENST00000430630 1300 ntBASIC17.72■□□□□ 0.43
ATP2A1O14983 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP2A1O14983 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATP2A1O14983 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ATP2A1O14983 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 AC084364.1-201ENST00000551967 1556 ntBASIC17.71■□□□□ 0.43
ATP2A1O14983 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP2A1O14983 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ATP2A1O14983 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.71■□□□□ 0.43
ATP2A1O14983 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP2A1O14983 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.71■□□□□ 0.43
ATP2A1O14983 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP2A1O14983 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ATP2A1O14983 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP2A1O14983 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ATP2A1O14983 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP2A1O14983 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP2A1O14983 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
ATP2A1O14983 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
ATP2A1O14983 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATP2A1O14983 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ATP2A1O14983 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP2A1O14983 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP2A1O14983 KRT8P44-201ENST00000441609 1350 ntBASIC17.7■□□□□ 0.42
ATP2A1O14983 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP2A1O14983 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
ATP2A1O14983 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.7■□□□□ 0.42
ATP2A1O14983 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP2A1O14983 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATP2A1O14983 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP2A1O14983 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
ATP2A1O14983 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.7■□□□□ 0.42
ATP2A1O14983 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.7■□□□□ 0.42
ATP2A1O14983 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 FAM86HP-204ENST00000513466 959 ntBASIC17.7■□□□□ 0.42
ATP2A1O14983 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP2A1O14983 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.7■□□□□ 0.42
ATP2A1O14983 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP2A1O14983 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
ATP2A1O14983 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 AC148477.4-201ENST00000613430 1793 ntBASIC17.7■□□□□ 0.42
ATP2A1O14983 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
ATP2A1O14983 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
ATP2A1O14983 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
ATP2A1O14983 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.7■□□□□ 0.42
ATP2A1O14983 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
ATP2A1O14983 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 AC007787.1-201ENST00000588095 1583 ntBASIC17.7■□□□□ 0.42
ATP2A1O14983 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ATP2A1O14983 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ATP2A1O14983 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ATP2A1O14983 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms