Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN9O14815 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN9O14815 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN9O14815 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN9O14815 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPN9O14815 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CAPN9O14815 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CAPN9O14815 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPN9O14815 AC104794.3-201ENST00000566840 1248 ntBASIC16.5■□□□□ 0.23
CAPN9O14815 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN9O14815 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.5■□□□□ 0.23
CAPN9O14815 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.5■□□□□ 0.23
CAPN9O14815 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.5■□□□□ 0.23
CAPN9O14815 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.5■□□□□ 0.23
CAPN9O14815 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN9O14815 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CAPN9O14815 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN9O14815 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
CAPN9O14815 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN9O14815 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CAPN9O14815 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CAPN9O14815 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CAPN9O14815 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN9O14815 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN9O14815 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN9O14815 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN9O14815 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.49■□□□□ 0.23
CAPN9O14815 AC074338.1-201ENST00000416825 156 ntBASIC16.49■□□□□ 0.23
CAPN9O14815 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN9O14815 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CAPN9O14815 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN9O14815 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN9O14815 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPN9O14815 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CAPN9O14815 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN9O14815 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.48■□□□□ 0.23
CAPN9O14815 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CAPN9O14815 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CAPN9O14815 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN9O14815 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN9O14815 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
CAPN9O14815 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 AC015922.1-201ENST00000421102 1152 ntBASIC16.48■□□□□ 0.23
CAPN9O14815 RPL13P2-201ENST00000440687 659 ntBASIC16.48■□□□□ 0.23
CAPN9O14815 FAM207CP-201ENST00000443486 507 ntBASIC16.48■□□□□ 0.23
CAPN9O14815 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN9O14815 SPDYE18-201ENST00000510091 1050 ntBASIC16.48■□□□□ 0.23
CAPN9O14815 DOC2GP-202ENST00000514950 1163 ntBASIC16.48■□□□□ 0.23
CAPN9O14815 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CAPN9O14815 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.48■□□□□ 0.23
CAPN9O14815 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 SRD5A3P1-201ENST00000603021 949 ntBASIC16.48■□□□□ 0.23
CAPN9O14815 AC004233.3-201ENST00000607794 1269 ntBASIC16.48■□□□□ 0.23
CAPN9O14815 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.48■□□□□ 0.23
CAPN9O14815 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.48■□□□□ 0.23
CAPN9O14815 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CAPN9O14815 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms