Protein–RNA interactions for Protein: I3L3R5

CCER2, Coiled-coil domain-containing glutamate-rich protein 2, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER2I3L3R5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCER2I3L3R5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CCER2I3L3R5 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC20.99■□□□□ 0.95
CCER2I3L3R5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC20.99■□□□□ 0.95
CCER2I3L3R5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.99■□□□□ 0.95
CCER2I3L3R5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.99■□□□□ 0.95
CCER2I3L3R5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.99■□□□□ 0.95
CCER2I3L3R5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.99■□□□□ 0.95
CCER2I3L3R5 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC20.99■□□□□ 0.95
CCER2I3L3R5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCER2I3L3R5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCER2I3L3R5 AL121723.1-201ENST00000445194 1519 ntBASIC20.99■□□□□ 0.95
CCER2I3L3R5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 POLD2P1-201ENST00000511220 997 ntBASIC20.98■□□□□ 0.95
CCER2I3L3R5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 MIR4453-201ENST00000584019 89 ntBASIC20.98■□□□□ 0.95
CCER2I3L3R5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 AL121894.2-201ENST00000602977 491 ntBASIC20.98■□□□□ 0.95
CCER2I3L3R5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC20.98■□□□□ 0.95
CCER2I3L3R5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 R3HDM2P2-201ENST00000401880 2116 ntBASIC20.98■□□□□ 0.95
CCER2I3L3R5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CCER2I3L3R5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCER2I3L3R5 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 AC015802.1-201ENST00000588104 1449 ntBASIC20.97■□□□□ 0.95
CCER2I3L3R5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 FES-203ENST00000394302 2133 ntTSL 5 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 KRT18P43-201ENST00000469825 1281 ntBASIC20.97■□□□□ 0.95
CCER2I3L3R5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CCER2I3L3R5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCER2I3L3R5 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms