Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 AL590560.3-201ENST00000623350 461 ntBASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 AL359258.3-201ENST00000622910 2331 ntBASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX49Q9Y6V7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AC090616.6-203ENST00000579186 1945 ntBASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AL512638.1-201ENST00000457493 794 ntBASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 TERF1P3-201ENST00000505638 1227 ntBASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AC005089.1-201ENST00000619486 2241 ntBASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 LINC01101-201ENST00000622953 1884 ntBASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
DDX49Q9Y6V7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.78■□□□□ 0.6
DDX49Q9Y6V7 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms