Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 AC079781.4-201ENST00000641908 219 ntBASIC15.04■□□□□ -0
AP4B1Q9Y6B7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.04■□□□□ -0
AP4B1Q9Y6B7 AC011477.6-201ENST00000604980 1927 ntBASIC15.04■□□□□ -0
AP4B1Q9Y6B7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AKAP8P1-201ENST00000434743 1349 ntBASIC15.03■□□□□ -0
AP4B1Q9Y6B7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 HAUS4P1-201ENST00000406739 1145 ntBASIC15.03■□□□□ -0
AP4B1Q9Y6B7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AL671277.1-201ENST00000429656 993 ntBASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AC004967.1-201ENST00000453589 447 ntBASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 RARRES2P8-201ENST00000566335 367 ntBASIC15.03■□□□□ -0
AP4B1Q9Y6B7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.03■□□□□ -0
AP4B1Q9Y6B7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AC099522.2-201ENST00000607001 744 ntBASIC15.03■□□□□ -0
AP4B1Q9Y6B7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 BEND3P1-201ENST00000421591 1944 ntBASIC15.03■□□□□ -0
AP4B1Q9Y6B7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 PTENP1-202ENST00000532280 3996 ntBASIC15.03■□□□□ -0
AP4B1Q9Y6B7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
AP4B1Q9Y6B7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.02■□□□□ -0
AP4B1Q9Y6B7 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms