Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CTDP1Q9Y5B0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 ACKR1-201ENST00000368121 1240 ntBASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 RN7SL219P-201ENST00000582872 296 ntBASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 AL033527.4-201ENST00000641026 673 ntBASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTDP1Q9Y5B0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CTDP1Q9Y5B0 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CTDP1Q9Y5B0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.96■□□□□ 0.46
CTDP1Q9Y5B0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 REXO1L6P-201ENST00000603433 1515 ntBASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 AC092933.1-201ENST00000393644 945 ntBASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 AC106760.1-201ENST00000508690 800 ntBASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 AC093525.8-201ENST00000624099 1342 ntBASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 MSTO2P-201ENST00000314835 1709 ntBASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.95■□□□□ 0.46
CTDP1Q9Y5B0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 BRWD1P1-201ENST00000401091 371 ntBASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 AC079316.1-201ENST00000548397 411 ntBASIC17.94■□□□□ 0.46
CTDP1Q9Y5B0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms