Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 AC109635.5-201ENST00000533593 962 ntBASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 AC027601.5-201ENST00000624065 2482 ntBASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.8□□□□□ -0.36
RCL1Q9Y2P8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 AL513480.1-201ENST00000451731 511 ntBASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 AC108073.2-201ENST00000464002 357 ntBASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 CXCL1P1-201ENST00000502804 216 ntBASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 MIR1199-201ENST00000621445 119 ntBASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 AL691432.1-201ENST00000596308 1422 ntBASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.79□□□□□ -0.36
RCL1Q9Y2P8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 BEND3P1-201ENST00000421591 1944 ntBASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 ACE3P-201ENST00000423435 1973 ntBASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RCL1Q9Y2P8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms