Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 AC138761.1-201ENST00000584393 385 ntBASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 AC099568.2-201ENST00000609194 695 ntBASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 AL662799.1-202ENST00000614205 422 ntBASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 AC007431.3-201ENST00000623221 587 ntBASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.42□□□□□ -0.1
DTX4Q9Y2E6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 PIN1P1-201ENST00000412108 996 ntBASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 MEP1AP4-201ENST00000423244 1087 ntBASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 AC123567.1-201ENST00000548294 1261 ntBASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 KRT8P44-201ENST00000441609 1350 ntBASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 AC023024.2-201ENST00000623561 1993 ntBASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 AP002414.2-201ENST00000591780 3365 ntBASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.41□□□□□ -0.1
DTX4Q9Y2E6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 CRB3P1-201ENST00000449338 276 ntBASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 RRP7BP-205ENST00000566851 833 ntBASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 AL049840.4-201ENST00000602422 811 ntBASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 AC008494.3-201ENST00000606615 944 ntBASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 AC093726.1-201ENST00000608064 963 ntBASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
DTX4Q9Y2E6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms