Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 AC023024.2-201ENST00000623561 1993 ntBASIC15.12■□□□□ 0.01
SNX6Q9UNH7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SNX6Q9UNH7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 LINC00628-201ENST00000628516 1289 ntBASIC15.11■□□□□ 0.01
SNX6Q9UNH7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 AC134684.3-201ENST00000641758 218 ntBASIC15.11■□□□□ 0.01
SNX6Q9UNH7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 OR2I1P-210ENST00000642037 4691 ntBASIC15.11■□□□□ 0.01
SNX6Q9UNH7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 AC084364.1-201ENST00000551967 1556 ntBASIC15.11■□□□□ 0.01
SNX6Q9UNH7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SNX6Q9UNH7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 AC091951.1-201ENST00000512854 2465 ntBASIC15.1■□□□□ 0.01
SNX6Q9UNH7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 AL080243.2-201ENST00000418783 582 ntBASIC15.1■□□□□ 0.01
SNX6Q9UNH7 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 AC004967.1-201ENST00000453589 447 ntBASIC15.1■□□□□ 0.01
SNX6Q9UNH7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 SLED1-202ENST00000512051 380 ntBASIC15.1■□□□□ 0.01
SNX6Q9UNH7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 AL033527.5-202ENST00000641632 1098 ntBASIC15.1■□□□□ 0.01
SNX6Q9UNH7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SNX6Q9UNH7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms