Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 DFFBP1-201ENST00000433250 979 ntBASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 AC026410.3-201ENST00000514280 936 ntBASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 BRI3BPP1-201ENST00000594224 787 ntBASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGC3Q9UN70 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 ZBED1P1-201ENST00000502364 1930 ntBASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 RN7SL204P-201ENST00000582831 262 ntBASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 LINC02560-201ENST00000596379 459 ntBASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 AL049840.4-201ENST00000602422 811 ntBASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 AL391825.1-201ENST00000457671 1364 ntBASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDHGC3Q9UN70 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 FER1L4-210ENST00000615531 5998 ntBASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGC3Q9UN70 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms