Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 AL359258.3-201ENST00000622910 2331 ntBASIC20.65■□□□□ 0.9
NPC1L1Q9UHC9 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NPC1L1Q9UHC9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NPC1L1Q9UHC9 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC20.64■□□□□ 0.9
NPC1L1Q9UHC9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.64■□□□□ 0.9
NPC1L1Q9UHC9 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NPC1L1Q9UHC9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.64■□□□□ 0.9
NPC1L1Q9UHC9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
NPC1L1Q9UHC9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
NPC1L1Q9UHC9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 ANKRD19P-201ENST00000338192 862 ntBASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 BCRP2-202ENST00000447763 634 ntBASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 AC026434.2-201ENST00000506094 1078 ntBASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 BCRP6-201ENST00000510112 632 ntBASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 BCRP7-201ENST00000511549 544 ntBASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 AL512343.1-201ENST00000605837 169 ntBASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPC1L1Q9UHC9 AC055811.4-201ENST00000624039 1754 ntBASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 CD8B2-202ENST00000417670 633 ntBASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 AC244669.2-201ENST00000612320 853 ntBASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 AC006058.4-201ENST00000624016 1670 ntBASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 LRRC59-203ENST00000576448 1531 ntBASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC20.63■□□□□ 0.89
NPC1L1Q9UHC9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 AC245100.3-201ENST00000441281 285 ntBASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 CROCCP4-201ENST00000457096 498 ntBASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 SNX29P1-201ENST00000548357 1007 ntBASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.62■□□□□ 0.89
NPC1L1Q9UHC9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms