Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CALCOCO1Q9P1Z2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CALCOCO1Q9P1Z2 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CALCOCO1Q9P1Z2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.14■□□□□ 0.33
CALCOCO1Q9P1Z2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CALCOCO1Q9P1Z2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CALCOCO1Q9P1Z2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CALCOCO1Q9P1Z2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CALCOCO1Q9P1Z2 REXO1L8P-201ENST00000604378 1897 ntBASIC17.14■□□□□ 0.33
CALCOCO1Q9P1Z2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CALCOCO1Q9P1Z2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 SSR4P1-203ENST00000599569 2260 ntBASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 FAM86C2P-203ENST00000528684 1004 ntBASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CALCOCO1Q9P1Z2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 AL035633.1-201ENST00000406139 838 ntBASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 AC005237.2-201ENST00000434368 219 ntBASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 AC027307.2-201ENST00000591252 911 ntBASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 AC005498.2-205ENST00000593218 784 ntBASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CALCOCO1Q9P1Z2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms