Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 TIMM17BP1-201ENST00000545713 516 ntBASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 SSR4P1-203ENST00000599569 2260 ntBASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CUEDC1Q9NWM3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 SPDYE19P-201ENST00000338590 713 ntBASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 U91328.1-201ENST00000437528 223 ntBASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 DOC2GP-202ENST00000514950 1163 ntBASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.1■□□□□ 0.01
CUEDC1Q9NWM3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 TOMM22P5-201ENST00000416399 439 ntBASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 SPTLC1P1-201ENST00000447199 261 ntBASIC15.09■□□□□ 0.01
CUEDC1Q9NWM3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms