Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF216Q9NWF9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF216Q9NWF9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF216Q9NWF9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AL049545.1-201ENST00000401856 572 ntBASIC18.73■□□□□ 0.59
RNF216Q9NWF9 RN7SKP112-201ENST00000411213 318 ntBASIC18.73■□□□□ 0.59
RNF216Q9NWF9 HIGD1AP15-201ENST00000416198 280 ntBASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 FAM58CP-201ENST00000435741 640 ntBASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 LHFPL3-AS1-206ENST00000449764 1196 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AC009119.1-203ENST00000565064 577 ntTSL 4 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AC234772.3-201ENST00000602277 528 ntBASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AC068137.2-201ENST00000605408 478 ntBASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AC026979.3-201ENST00000607315 403 ntBASIC18.73■□□□□ 0.59
RNF216Q9NWF9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 AC022140.2-201ENST00000623500 188 ntBASIC18.73■□□□□ 0.59
RNF216Q9NWF9 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 SLC3A1-208ENST00000410056 1426 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 PSMC1P9-201ENST00000396338 1335 ntBASIC18.73■□□□□ 0.59
RNF216Q9NWF9 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF216Q9NWF9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 AC019185.2-201ENST00000424628 520 ntTSL 4 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 RPS6P15-201ENST00000431996 751 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 FAM185BP-201ENST00000443595 716 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 MTCO3P17-201ENST00000443775 513 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 AC025181.1-201ENST00000477507 416 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 OR2A20P-203ENST00000498397 1268 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 AC004835.2-201ENST00000603762 682 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 AC013400.1-201ENST00000607190 545 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 VN1R74P-201ENST00000613259 503 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 LINC01451-201ENST00000623792 534 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 AC132825.7-201ENST00000638744 335 ntBASIC18.72■□□□□ 0.59
RNF216Q9NWF9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
RNF216Q9NWF9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms