Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 AL590560.3-201ENST00000623350 461 ntBASIC14.89□□□□□ -0.03
BRF2Q9HAW0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.89□□□□□ -0.03
BRF2Q9HAW0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.89□□□□□ -0.03
BRF2Q9HAW0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 AC104457.1-201ENST00000401024 814 ntBASIC14.88□□□□□ -0.03
BRF2Q9HAW0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.88□□□□□ -0.03
BRF2Q9HAW0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.88□□□□□ -0.03
BRF2Q9HAW0 AC044860.1-202ENST00000559481 777 ntBASIC14.88□□□□□ -0.03
BRF2Q9HAW0 AC092337.1-201ENST00000568699 1129 ntBASIC14.88□□□□□ -0.03
BRF2Q9HAW0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 AC000095.1-201ENST00000603208 874 ntBASIC14.88□□□□□ -0.03
BRF2Q9HAW0 AC025181.2-201ENST00000606994 802 ntBASIC14.88□□□□□ -0.03
BRF2Q9HAW0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 BTBD7P1-201ENST00000447253 1453 ntBASIC14.88□□□□□ -0.03
BRF2Q9HAW0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 AC023824.1-201ENST00000562945 2975 ntBASIC14.88□□□□□ -0.03
BRF2Q9HAW0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.88□□□□□ -0.03
BRF2Q9HAW0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
BRF2Q9HAW0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms