Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 AL596257.1-201ENST00000641463 2694 ntBASIC16.89■□□□□ 0.29
HIPK3Q9H422 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.89■□□□□ 0.29
HIPK3Q9H422 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.89■□□□□ 0.29
HIPK3Q9H422 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.89■□□□□ 0.29
HIPK3Q9H422 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.89■□□□□ 0.29
HIPK3Q9H422 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 RPS2P36-201ENST00000456516 831 ntBASIC16.89■□□□□ 0.29
HIPK3Q9H422 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.89■□□□□ 0.29
HIPK3Q9H422 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.89■□□□□ 0.29
HIPK3Q9H422 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.89■□□□□ 0.29
HIPK3Q9H422 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 AC128714.1-201ENST00000637035 887 ntBASIC16.89■□□□□ 0.29
HIPK3Q9H422 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HIPK3Q9H422 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HIPK3Q9H422 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HIPK3Q9H422 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HIPK3Q9H422 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIPK3Q9H422 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.88■□□□□ 0.29
HIPK3Q9H422 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 AL139094.1-201ENST00000405549 1188 ntBASIC16.88■□□□□ 0.29
HIPK3Q9H422 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.88■□□□□ 0.29
HIPK3Q9H422 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 PCDHB19P-201ENST00000570871 2371 ntBASIC16.88■□□□□ 0.29
HIPK3Q9H422 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.88■□□□□ 0.29
HIPK3Q9H422 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIPK3Q9H422 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 Z97180.1-201ENST00000445173 988 ntBASIC16.87■□□□□ 0.29
HIPK3Q9H422 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 RN7SL11P-201ENST00000471305 293 ntBASIC16.87■□□□□ 0.29
HIPK3Q9H422 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 RN7SL713P-201ENST00000582127 302 ntBASIC16.87■□□□□ 0.29
HIPK3Q9H422 SPCS2P2-201ENST00000603270 608 ntBASIC16.87■□□□□ 0.29
HIPK3Q9H422 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIPK3Q9H422 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.87■□□□□ 0.29
HIPK3Q9H422 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms