Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 MEX3B-202ENST00000558133 4333 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 INTS4P1-201ENST00000438455 1935 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AC073508.3-201ENST00000619697 1419 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AC005252.3-201ENST00000623855 2258 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PRORSD1P-201ENST00000295112 541 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 RPS14P4-201ENST00000415880 418 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PMS2P1-201ENST00000431037 1228 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 MTND4LP12-201ENST00000448237 295 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PAWRP1-201ENST00000451083 565 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 YBX1P2-201ENST00000489612 999 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AC008550.1-201ENST00000511500 884 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AC005412.3-201ENST00000580309 715 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 BSG-214ENST00000614867 960 ntTSL 3 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AC006213.4-201ENST00000616184 634 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 REXO1L3P-201ENST00000622202 1288 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 AP001002.2-201ENST00000625137 386 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 TMEM191A-211ENST00000637163 1067 ntBASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC4.23□□□□□ -1.73
LCE3DQ9BYE3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms