Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 AC087499.5-201ENST00000452760 1342 ntBASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 SERBP1P3-201ENST00000459980 809 ntBASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 SPDYE18-201ENST00000510091 1050 ntBASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 AL590560.3-201ENST00000623350 461 ntBASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 AC004461.2-201ENST00000629517 803 ntBASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 OR6D1P-203ENST00000641209 4860 ntBASIC14.24□□□□□ -0.13
RSPO3Q9BXY4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 AC027369.6-201ENST00000525520 931 ntBASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 ZNF890P-202ENST00000530367 1156 ntBASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 AC000095.1-201ENST00000603208 874 ntBASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 AC093028.1-201ENST00000622998 982 ntBASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 AC138969.3-201ENST00000546612 1459 ntBASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 AC138932.2-201ENST00000548268 1459 ntBASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 AC126755.4-201ENST00000549796 1459 ntBASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RSPO3Q9BXY4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.22□□□□□ -0.13
RSPO3Q9BXY4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms