Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFAF3Q9BU61 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFAF3Q9BU61 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.17□□□□□ -0.46
NDUFAF3Q9BU61 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFAF3Q9BU61 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFAF3Q9BU61 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFAF3Q9BU61 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NDUFAF3Q9BU61 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NDUFAF3Q9BU61 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
NDUFAF3Q9BU61 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.17□□□□□ -0.46
NDUFAF3Q9BU61 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 AC112504.1-201ENST00000623415 1841 ntBASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 AC006277.1-201ENST00000624348 1610 ntBASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 AC073621.1-201ENST00000392730 636 ntBASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 AC091167.2-201ENST00000579581 588 ntBASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 AL139424.1-201ENST00000607572 797 ntBASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.16□□□□□ -0.46
NDUFAF3Q9BU61 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 AL731571.1-201ENST00000617058 5428 ntBASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 ELK2BP-201ENST00000415014 1224 ntBASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 AC064836.3-201ENST00000607928 673 ntBASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 AC079781.4-201ENST00000641908 219 ntBASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 AC089987.1-201ENST00000551654 2209 ntBASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.15□□□□□ -0.46
NDUFAF3Q9BU61 AJ011931.1-201ENST00000618749 2492 ntBASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms