Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDC6Q99741 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.98□□□□□ -0.01
CDC6Q99741 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.98□□□□□ -0.01
CDC6Q99741 ECM1P1-201ENST00000604092 1279 ntBASIC14.98□□□□□ -0.01
CDC6Q99741 AC138649.2-201ENST00000615886 705 ntBASIC14.98□□□□□ -0.01
CDC6Q99741 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.98□□□□□ -0.01
CDC6Q99741 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDC6Q99741 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDC6Q99741 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDC6Q99741 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CDC6Q99741 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDC6Q99741 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.98□□□□□ -0.01
CDC6Q99741 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CDC6Q99741 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CDC6Q99741 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDC6Q99741 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDC6Q99741 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDC6Q99741 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CDC6Q99741 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CDC6Q99741 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 PCDHB19P-201ENST00000570871 2371 ntBASIC14.97□□□□□ -0.01
CDC6Q99741 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.97□□□□□ -0.01
CDC6Q99741 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.97□□□□□ -0.01
CDC6Q99741 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC6Q99741 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.97□□□□□ -0.01
CDC6Q99741 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CDC6Q99741 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CDC6Q99741 COX5BP1-201ENST00000507622 393 ntBASIC14.97□□□□□ -0.01
CDC6Q99741 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.97□□□□□ -0.01
CDC6Q99741 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC6Q99741 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.97□□□□□ -0.01
CDC6Q99741 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.97□□□□□ -0.01
CDC6Q99741 AL451050.2-201ENST00000606967 682 ntBASIC14.97□□□□□ -0.01
CDC6Q99741 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.97□□□□□ -0.01
CDC6Q99741 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
CDC6Q99741 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC6Q99741 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC6Q99741 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.97□□□□□ -0.01
CDC6Q99741 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CDC6Q99741 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDC6Q99741 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDC6Q99741 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDC6Q99741 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC6Q99741 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC6Q99741 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDC6Q99741 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDC6Q99741 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.96□□□□□ -0.01
CDC6Q99741 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC6Q99741 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.96□□□□□ -0.01
CDC6Q99741 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC6Q99741 TMEM198B-204ENST00000484016 896 ntBASIC14.96□□□□□ -0.01
CDC6Q99741 AC245884.6-201ENST00000515672 1067 ntBASIC14.96□□□□□ -0.01
CDC6Q99741 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CDC6Q99741 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.96□□□□□ -0.01
CDC6Q99741 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC6Q99741 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 AC007663.3-201ENST00000609632 465 ntBASIC14.96□□□□□ -0.01
CDC6Q99741 AC091812.3-201ENST00000621362 345 ntBASIC14.96□□□□□ -0.01
CDC6Q99741 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.96□□□□□ -0.01
CDC6Q99741 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
CDC6Q99741 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDC6Q99741 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.96□□□□□ -0.01
CDC6Q99741 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
CDC6Q99741 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC6Q99741 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC6Q99741 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC6Q99741 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC6Q99741 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC6Q99741 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDC6Q99741 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms