Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.21■□□□□ 0.03
NCLNQ969V3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NCLNQ969V3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.21■□□□□ 0.03
NCLNQ969V3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.21■□□□□ 0.03
NCLNQ969V3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NCLNQ969V3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.21■□□□□ 0.02
NCLNQ969V3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCLNQ969V3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCLNQ969V3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NCLNQ969V3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.21■□□□□ 0.02
NCLNQ969V3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.21■□□□□ 0.02
NCLNQ969V3 TCAF2P1-201ENST00000291129 2421 ntBASIC15.21■□□□□ 0.02
NCLNQ969V3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NCLNQ969V3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NCLNQ969V3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.2■□□□□ 0.02
NCLNQ969V3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NCLNQ969V3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
NCLNQ969V3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.2■□□□□ 0.02
NCLNQ969V3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.2■□□□□ 0.02
NCLNQ969V3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.2■□□□□ 0.02
NCLNQ969V3 AC245100.5-201ENST00000452108 331 ntBASIC15.2■□□□□ 0.02
NCLNQ969V3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.2■□□□□ 0.02
NCLNQ969V3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.2■□□□□ 0.02
NCLNQ969V3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.2■□□□□ 0.02
NCLNQ969V3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.2■□□□□ 0.02
NCLNQ969V3 AC018529.1-201ENST00000613063 361 ntBASIC15.2■□□□□ 0.02
NCLNQ969V3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NCLNQ969V3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.2■□□□□ 0.02
NCLNQ969V3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.2■□□□□ 0.02
NCLNQ969V3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.2■□□□□ 0.02
NCLNQ969V3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NCLNQ969V3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NCLNQ969V3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
NCLNQ969V3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.2■□□□□ 0.02
NCLNQ969V3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NCLNQ969V3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.19■□□□□ 0.02
NCLNQ969V3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 TUBB3P1-201ENST00000405796 1332 ntBASIC15.19■□□□□ 0.02
NCLNQ969V3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NCLNQ969V3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.19■□□□□ 0.02
NCLNQ969V3 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.19■□□□□ 0.02
NCLNQ969V3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 CYMP-203ENST00000474680 1263 ntBASIC15.19■□□□□ 0.02
NCLNQ969V3 AC067863.1-201ENST00000494933 530 ntBASIC15.19■□□□□ 0.02
NCLNQ969V3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 MIR4453-201ENST00000584019 89 ntBASIC15.19■□□□□ 0.02
NCLNQ969V3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.19■□□□□ 0.02
NCLNQ969V3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
NCLNQ969V3 AC003101.2-201ENST00000612557 442 ntBASIC15.19■□□□□ 0.02
NCLNQ969V3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.19■□□□□ 0.02
NCLNQ969V3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.19■□□□□ 0.02
NCLNQ969V3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.19■□□□□ 0.02
NCLNQ969V3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.19■□□□□ 0.02
NCLNQ969V3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
NCLNQ969V3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NCLNQ969V3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NCLNQ969V3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms