Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHC3Q92529 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.57■□□□□ 0.24
SHC3Q92529 REXO1L4P-201ENST00000605109 1937 ntBASIC16.57■□□□□ 0.24
SHC3Q92529 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SHC3Q92529 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.56■□□□□ 0.24
SHC3Q92529 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SHC3Q92529 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.56■□□□□ 0.24
SHC3Q92529 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SHC3Q92529 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.56■□□□□ 0.24
SHC3Q92529 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SHC3Q92529 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.56■□□□□ 0.24
SHC3Q92529 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.56■□□□□ 0.24
SHC3Q92529 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.56■□□□□ 0.24
SHC3Q92529 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.56■□□□□ 0.24
SHC3Q92529 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHC3Q92529 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SHC3Q92529 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.56■□□□□ 0.24
SHC3Q92529 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SHC3Q92529 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.55■□□□□ 0.24
SHC3Q92529 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.55■□□□□ 0.24
SHC3Q92529 AC011270.2-201ENST00000624293 2550 ntBASIC16.55■□□□□ 0.24
SHC3Q92529 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.55■□□□□ 0.24
SHC3Q92529 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.55■□□□□ 0.24
SHC3Q92529 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SHC3Q92529 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.55■□□□□ 0.24
SHC3Q92529 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.55■□□□□ 0.24
SHC3Q92529 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.55■□□□□ 0.24
SHC3Q92529 RARRES2P5-201ENST00000564013 466 ntBASIC16.55■□□□□ 0.24
SHC3Q92529 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.55■□□□□ 0.24
SHC3Q92529 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SHC3Q92529 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.55■□□□□ 0.24
SHC3Q92529 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SHC3Q92529 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SHC3Q92529 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHC3Q92529 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.54■□□□□ 0.24
SHC3Q92529 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.54■□□□□ 0.24
SHC3Q92529 CICP24-201ENST00000605464 2705 ntBASIC16.54■□□□□ 0.24
SHC3Q92529 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.54■□□□□ 0.24
SHC3Q92529 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.54■□□□□ 0.24
SHC3Q92529 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.54■□□□□ 0.24
SHC3Q92529 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SHC3Q92529 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.54■□□□□ 0.24
SHC3Q92529 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SHC3Q92529 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.54■□□□□ 0.24
SHC3Q92529 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.54■□□□□ 0.24
SHC3Q92529 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.54■□□□□ 0.24
SHC3Q92529 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.54■□□□□ 0.24
SHC3Q92529 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.54■□□□□ 0.24
SHC3Q92529 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.54■□□□□ 0.24
SHC3Q92529 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHC3Q92529 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.54■□□□□ 0.24
SHC3Q92529 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.54■□□□□ 0.24
SHC3Q92529 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.54■□□□□ 0.24
SHC3Q92529 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms