Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 DKFZP434H168-201ENST00000567381 1905 ntBASIC21.63■■□□□ 1.05
TMC1Q8TDI8 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TMC1Q8TDI8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 AC233724.13-201ENST00000598383 410 ntBASIC21.62■■□□□ 1.05
TMC1Q8TDI8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMC1Q8TDI8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 BCRP2-202ENST00000447763 634 ntBASIC21.61■■□□□ 1.05
TMC1Q8TDI8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 AC119751.2-201ENST00000504529 210 ntBASIC21.61■■□□□ 1.05
TMC1Q8TDI8 BCRP6-201ENST00000510112 632 ntBASIC21.61■■□□□ 1.05
TMC1Q8TDI8 BCRP7-201ENST00000511549 544 ntBASIC21.61■■□□□ 1.05
TMC1Q8TDI8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 ENPP7P5-201ENST00000541031 1031 ntBASIC21.61■■□□□ 1.05
TMC1Q8TDI8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 CLUHP6-201ENST00000580789 941 ntBASIC21.61■■□□□ 1.05
TMC1Q8TDI8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.61■■□□□ 1.05
TMC1Q8TDI8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 ANKRD19P-201ENST00000338192 862 ntBASIC21.6■■□□□ 1.05
TMC1Q8TDI8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.6■■□□□ 1.05
TMC1Q8TDI8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms