Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 FRMPD2B-201ENST00000431305 1347 ntBASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 FTH1P22-201ENST00000456305 520 ntBASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 PGAM1P12-201ENST00000505622 748 ntBASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 POU5F1P2-201ENST00000521750 823 ntBASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AGGF1P2-201ENST00000426656 2106 ntBASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
ALMS1Q8TCU4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 MST1L-201ENST00000442552 2185 ntBASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 AQP7P5-201ENST00000428759 1049 ntBASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 AQP7P4-201ENST00000447083 1042 ntBASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 AQP7P2-201ENST00000453967 1041 ntBASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 AQP7P3-201ENST00000624547 1041 ntBASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 THY1-209ENST00000580275 578 ntTSL 3 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 AC009560.1-201ENST00000620208 434 ntBASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
ALMS1Q8TCU4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 AC100827.2-201ENST00000563214 1194 ntBASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 RPL7P35-201ENST00000446943 740 ntBASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
ALMS1Q8TCU4 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms