Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 AC104073.2-201ENST00000453737 312 ntBASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 TUBB8P8-201ENST00000458717 1058 ntBASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 RPL18P13-201ENST00000478088 569 ntBASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 AC242376.1-201ENST00000559033 726 ntBASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 DUX4L46-201ENST00000566845 751 ntBASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 MIR3677-201ENST00000578964 60 ntBASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 RPL17P45-201ENST00000586289 509 ntBASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.27□□□□□ -0.13
COL27A1Q8IZC6 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 AC090616.6-203ENST00000579186 1945 ntBASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 RN7SL67P-201ENST00000492147 296 ntBASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 RTN3P1-201ENST00000536295 711 ntBASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 AL353770.1-201ENST00000614915 403 ntBASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
COL27A1Q8IZC6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 Z97180.1-201ENST00000445173 988 ntBASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CTBP2P4-201ENST00000513884 920 ntBASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 IGLV3-15-201ENST00000518356 244 ntBASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CICP11-201ENST00000434745 2827 ntBASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CYP4F23P-201ENST00000593402 1579 ntBASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL27A1Q8IZC6 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms