Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 PTENP1-202ENST00000532280 3996 ntBASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 AC093909.1-201ENST00000504731 1122 ntBASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 AC112191.1-201ENST00000523689 701 ntBASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 AKAP8P1-201ENST00000434743 1349 ntBASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LRRTM1Q86UE6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 BX640514.1-201ENST00000583223 1918 ntBASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 AZGP1P1-201ENST00000411909 902 ntBASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 AC011467.4-201ENST00000594891 528 ntBASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.55□□□□□ -0.24
LRRTM1Q86UE6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms