Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF550Q7Z398 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 AC097376.2-205ENST00000610159 5334 ntBASIC14.38□□□□□ -0.11
ZNF550Q7Z398 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 MIR661-201ENST00000384842 89 ntBASIC14.38□□□□□ -0.11
ZNF550Q7Z398 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 AC002472.2-201ENST00000442739 958 ntBASIC14.38□□□□□ -0.11
ZNF550Q7Z398 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 SLED1-202ENST00000512051 380 ntBASIC14.38□□□□□ -0.11
ZNF550Q7Z398 RN7SL204P-201ENST00000582831 262 ntBASIC14.38□□□□□ -0.11
ZNF550Q7Z398 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 SPDYE12P-201ENST00000618416 771 ntBASIC14.38□□□□□ -0.11
ZNF550Q7Z398 AC073592.8-201ENST00000624126 511 ntBASIC14.38□□□□□ -0.11
ZNF550Q7Z398 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF550Q7Z398 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 Z97205.2-201ENST00000564697 1639 ntBASIC14.37□□□□□ -0.11
ZNF550Q7Z398 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 RPL37AP1-201ENST00000412502 279 ntBASIC14.37□□□□□ -0.11
ZNF550Q7Z398 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.37□□□□□ -0.11
ZNF550Q7Z398 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 DBET-201ENST00000630918 3363 ntBASIC14.37□□□□□ -0.11
ZNF550Q7Z398 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF550Q7Z398 AC148477.4-201ENST00000613430 1793 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms