Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC149Q6ZUS6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 AC092364.2-201ENST00000596710 2692 ntBASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 ACTBP8-201ENST00000403258 1108 ntBASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 RNA5SP486-201ENST00000515961 83 ntBASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 RN7SL190P-201ENST00000582519 257 ntBASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC149Q6ZUS6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 AL138709.1-201ENST00000614840 1693 ntBASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 CD8B2-202ENST00000417670 633 ntBASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 MTX1P1-201ENST00000440904 838 ntBASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 AL591846.1-201ENST00000451736 433 ntBASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 AL021578.1-201ENST00000613646 709 ntBASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 AC005695.3-201ENST00000614522 232 ntBASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC149Q6ZUS6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 1080.2 ms