Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 AL805961.1-203ENST00000641078 1258 ntBASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.51■□□□□ 0.23
CNKSR3Q6P9H4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 GHSR-202ENST00000427970 912 ntBASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 AC012618.1-201ENST00000461223 412 ntBASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 PRKXP1-201ENST00000561423 1122 ntBASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 DUX4L47-201ENST00000566374 394 ntBASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 MIR5572-201ENST00000583188 137 ntBASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 AL133499.1-201ENST00000596207 608 ntBASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 AC005332.8-201ENST00000622750 2735 ntBASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.5■□□□□ 0.23
CNKSR3Q6P9H4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 AC004466.1-201ENST00000599515 1080 ntBASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 LINC02447-202ENST00000501888 2146 ntBASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CNKSR3Q6P9H4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms