Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 AC092329.2-201ENST00000598402 547 ntBASIC14.74□□□□□ -0.05
LPCAT4Q643R3 AL031055.1-201ENST00000606362 631 ntBASIC14.74□□□□□ -0.05
LPCAT4Q643R3 AL589702.1-201ENST00000641229 1509 ntBASIC14.74□□□□□ -0.05
LPCAT4Q643R3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LPCAT4Q643R3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 BNIP3P1-202ENST00000550043 1585 ntBASIC14.73□□□□□ -0.05
LPCAT4Q643R3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 ELK2BP-201ENST00000415014 1224 ntBASIC14.73□□□□□ -0.05
LPCAT4Q643R3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 TSSC2-201ENST00000450217 709 ntBASIC14.73□□□□□ -0.05
LPCAT4Q643R3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.73□□□□□ -0.05
LPCAT4Q643R3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LPCAT4Q643R3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.72□□□□□ -0.05
LPCAT4Q643R3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 LINC00265-3P-201ENST00000447588 903 ntBASIC14.72□□□□□ -0.05
LPCAT4Q643R3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 AC087386.2-201ENST00000623212 4637 ntBASIC14.72□□□□□ -0.05
LPCAT4Q643R3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.72□□□□□ -0.05
LPCAT4Q643R3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms