Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 AL031284.1-201ENST00000419297 478 ntBASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 AC068137.2-201ENST00000605408 478 ntBASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
LINC00242Q5T6M2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 AC079776.4-201ENST00000511039 504 ntBASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 RARRES2P8-201ENST00000566335 367 ntBASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 REXO1L2P-201ENST00000425429 2069 ntBASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 AC084364.1-201ENST00000551967 1556 ntBASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.68□□□□□ -0.7
LINC00242Q5T6M2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms