Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 BX284668.2-205ENST00000619677 828 ntBASIC9.32□□□□□ -0.92
HSPG2P98160 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC9.32□□□□□ -0.92
HSPG2P98160 AL603764.1-201ENST00000636452 321 ntBASIC9.32□□□□□ -0.92
HSPG2P98160 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HSPG2P98160 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
HSPG2P98160 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
HSPG2P98160 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HSPG2P98160 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HSPG2P98160 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
HSPG2P98160 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
HSPG2P98160 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 CCL25-202ENST00000315626 450 ntTSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 HLA-DMA-203ENST00000395305 777 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 RPL14-203ENST00000416518 812 ntTSL 3 BASIC9.31□□□□□ -0.92
HSPG2P98160 AC108734.2-201ENST00000420887 1069 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC9.31□□□□□ -0.92
HSPG2P98160 CHCHD2P9-201ENST00000461726 456 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC9.31□□□□□ -0.92
HSPG2P98160 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC9.31□□□□□ -0.92
HSPG2P98160 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC9.31□□□□□ -0.92
HSPG2P98160 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
HSPG2P98160 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC9.31□□□□□ -0.92
HSPG2P98160 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
HSPG2P98160 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 AC113347.2-201ENST00000512350 279 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 MED11-202ENST00000573708 802 ntTSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC9.31□□□□□ -0.92
HSPG2P98160 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 AC110057.1-201ENST00000636031 898 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC9.31□□□□□ -0.92
HSPG2P98160 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
HSPG2P98160 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 ORAOV1P1-201ENST00000503108 395 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC9.31□□□□□ -0.92
HSPG2P98160 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC9.31□□□□□ -0.92
HSPG2P98160 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC9.31□□□□□ -0.92
HSPG2P98160 MIR2392-201ENST00000584881 84 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 AC055811.3-201ENST00000584952 686 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 HCG18-241ENST00000602290 821 ntTSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC9.31□□□□□ -0.92
HSPG2P98160 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 FAM90A21P-201ENST00000510875 1396 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 FAM90A15P-201ENST00000514465 1395 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 FAM90A6P-201ENST00000515148 1394 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 FAM90A16P-201ENST00000526662 1395 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 FAM90A9P-201ENST00000527940 1395 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 FAM90A5P-201ENST00000528738 1395 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 FAM90A14P-201ENST00000530386 1395 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 FAM90A13P-201ENST00000534703 1395 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 AC011676.5-201ENST00000624864 2660 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC9.31□□□□□ -0.92
HSPG2P98160 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
HSPG2P98160 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
HSPG2P98160 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 AC012441.2-201ENST00000444843 739 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HSPG2P98160 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC9.31□□□□□ -0.92
HSPG2P98160 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
HSPG2P98160 AC087392.5-201ENST00000612517 489 ntBASIC9.31□□□□□ -0.92
HSPG2P98160 HELLS-212ENST00000630929 400 ntTSL 5 BASIC9.31□□□□□ -0.92
HSPG2P98160 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
HSPG2P98160 KRT18P9-201ENST00000604826 1300 ntBASIC9.3□□□□□ -0.92
HSPG2P98160 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
HSPG2P98160 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC9.3□□□□□ -0.92
HSPG2P98160 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
HSPG2P98160 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
HSPG2P98160 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
HSPG2P98160 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
HSPG2P98160 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
HSPG2P98160 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
HSPG2P98160 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
HSPG2P98160 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC9.3□□□□□ -0.92
HSPG2P98160 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
HSPG2P98160 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC9.3□□□□□ -0.92
HSPG2P98160 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC9.3□□□□□ -0.92
HSPG2P98160 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC9.3□□□□□ -0.92
HSPG2P98160 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC9.3□□□□□ -0.92
HSPG2P98160 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
HSPG2P98160 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC9.3□□□□□ -0.92
HSPG2P98160 AC084364.1-201ENST00000551967 1556 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms