Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.62□□□□□ -0.07
VLDLRP98155 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 AC002056.1-201ENST00000395613 760 ntBASIC14.62□□□□□ -0.07
VLDLRP98155 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VLDLRP98155 EEF1DP4-201ENST00000446006 880 ntBASIC14.62□□□□□ -0.07
VLDLRP98155 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.62□□□□□ -0.07
VLDLRP98155 YBX1P5-201ENST00000509441 847 ntBASIC14.62□□□□□ -0.07
VLDLRP98155 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.62□□□□□ -0.07
VLDLRP98155 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.62□□□□□ -0.07
VLDLRP98155 HNRNPUP1-201ENST00000554987 333 ntBASIC14.62□□□□□ -0.07
VLDLRP98155 RARRES2P8-201ENST00000566335 367 ntBASIC14.62□□□□□ -0.07
VLDLRP98155 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.62□□□□□ -0.07
VLDLRP98155 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.62□□□□□ -0.07
VLDLRP98155 AC097359.3-201ENST00000603982 1210 ntBASIC14.62□□□□□ -0.07
VLDLRP98155 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VLDLRP98155 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.62□□□□□ -0.07
VLDLRP98155 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
VLDLRP98155 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
VLDLRP98155 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.62□□□□□ -0.07
VLDLRP98155 KRT18P28-201ENST00000453838 1332 ntBASIC14.62□□□□□ -0.07
VLDLRP98155 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.62□□□□□ -0.07
VLDLRP98155 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VLDLRP98155 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.61□□□□□ -0.07
VLDLRP98155 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
VLDLRP98155 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.61□□□□□ -0.07
VLDLRP98155 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 AC142381.1-201ENST00000426099 345 ntBASIC14.61□□□□□ -0.07
VLDLRP98155 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.61□□□□□ -0.07
VLDLRP98155 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.61□□□□□ -0.07
VLDLRP98155 AC074386.1-202ENST00000463561 864 ntBASIC14.61□□□□□ -0.07
VLDLRP98155 RNA5SP410-201ENST00000516285 106 ntBASIC14.61□□□□□ -0.07
VLDLRP98155 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.61□□□□□ -0.07
VLDLRP98155 PDPK2P-202ENST00000562415 1191 ntBASIC14.61□□□□□ -0.07
VLDLRP98155 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
VLDLRP98155 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.61□□□□□ -0.07
VLDLRP98155 LINC02084-201ENST00000606069 1096 ntBASIC14.61□□□□□ -0.07
VLDLRP98155 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VLDLRP98155 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.61□□□□□ -0.07
VLDLRP98155 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
VLDLRP98155 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.61□□□□□ -0.07
VLDLRP98155 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VLDLRP98155 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VLDLRP98155 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VLDLRP98155 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VLDLRP98155 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
VLDLRP98155 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.6□□□□□ -0.07
VLDLRP98155 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VLDLRP98155 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VLDLRP98155 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.6□□□□□ -0.07
VLDLRP98155 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VLDLRP98155 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VLDLRP98155 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.6□□□□□ -0.07
VLDLRP98155 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VLDLRP98155 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VLDLRP98155 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VLDLRP98155 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms