Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCNA1P78396 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.55■□□□□ 0.4
CCNA1P78396 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.55■□□□□ 0.4
CCNA1P78396 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
CCNA1P78396 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 EIF4HP1-201ENST00000453115 687 ntBASIC17.55■□□□□ 0.4
CCNA1P78396 UPF3AP2-201ENST00000457924 1132 ntBASIC17.55■□□□□ 0.4
CCNA1P78396 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.55■□□□□ 0.4
CCNA1P78396 AC022616.1-201ENST00000518688 554 ntBASIC17.55■□□□□ 0.4
CCNA1P78396 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.55■□□□□ 0.4
CCNA1P78396 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.55■□□□□ 0.4
CCNA1P78396 AC138649.2-201ENST00000615886 705 ntBASIC17.55■□□□□ 0.4
CCNA1P78396 AC015967.2-201ENST00000624092 234 ntBASIC17.55■□□□□ 0.4
CCNA1P78396 AC006435.4-201ENST00000625037 234 ntBASIC17.55■□□□□ 0.4
CCNA1P78396 AL356737.1-201ENST00000634391 234 ntBASIC17.55■□□□□ 0.4
CCNA1P78396 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCNA1P78396 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.55■□□□□ 0.4
CCNA1P78396 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.55■□□□□ 0.4
CCNA1P78396 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.55■□□□□ 0.4
CCNA1P78396 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCNA1P78396 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CCNA1P78396 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.54■□□□□ 0.4
CCNA1P78396 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCNA1P78396 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
CCNA1P78396 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.54■□□□□ 0.4
CCNA1P78396 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.54■□□□□ 0.4
CCNA1P78396 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCNA1P78396 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.54■□□□□ 0.4
CCNA1P78396 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 OR10B1P-201ENST00000601666 907 ntBASIC17.54■□□□□ 0.4
CCNA1P78396 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.54■□□□□ 0.4
CCNA1P78396 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.54■□□□□ 0.4
CCNA1P78396 AC022188.1-201ENST00000620960 1664 ntBASIC17.54■□□□□ 0.4
CCNA1P78396 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CCNA1P78396 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNA1P78396 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CCNA1P78396 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CCNA1P78396 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCNA1P78396 AC084364.1-201ENST00000551967 1556 ntBASIC17.53■□□□□ 0.4
CCNA1P78396 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNA1P78396 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNA1P78396 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCNA1P78396 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNA1P78396 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNA1P78396 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNA1P78396 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNA1P78396 AC079328.1-201ENST00000560358 952 ntBASIC17.53■□□□□ 0.4
CCNA1P78396 MIR3619-201ENST00000579667 83 ntBASIC17.53■□□□□ 0.4
CCNA1P78396 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNA1P78396 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.53■□□□□ 0.4
CCNA1P78396 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 AC138627.1-207ENST00000641560 1006 ntBASIC17.53■□□□□ 0.4
CCNA1P78396 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNA1P78396 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCNA1P78396 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.53■□□□□ 0.4
CCNA1P78396 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNA1P78396 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNA1P78396 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCNA1P78396 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNA1P78396 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.52■□□□□ 0.4
CCNA1P78396 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CCNA1P78396 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCNA1P78396 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNA1P78396 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNA1P78396 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms