Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLDN2P57739 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.32■□□□□ 0.04
CLDN2P57739 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN2P57739 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN2P57739 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN2P57739 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN2P57739 AP005019.2-201ENST00000615104 511 ntBASIC15.32■□□□□ 0.04
CLDN2P57739 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN2P57739 BX539320.1-201ENST00000623759 877 ntBASIC15.32■□□□□ 0.04
CLDN2P57739 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLDN2P57739 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLDN2P57739 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN2P57739 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 CICP13-201ENST00000422015 2789 ntBASIC15.32■□□□□ 0.04
CLDN2P57739 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN2P57739 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN2P57739 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN2P57739 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN2P57739 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN2P57739 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN2P57739 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN2P57739 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN2P57739 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLDN2P57739 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN2P57739 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLDN2P57739 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN2P57739 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 FAM21FP-201ENST00000426241 1131 ntBASIC15.31■□□□□ 0.04
CLDN2P57739 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 AC022494.1-201ENST00000466044 728 ntBASIC15.31■□□□□ 0.04
CLDN2P57739 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.31■□□□□ 0.04
CLDN2P57739 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDN2P57739 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLDN2P57739 RN7SL219P-201ENST00000582872 296 ntBASIC15.31■□□□□ 0.04
CLDN2P57739 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN2P57739 AC145423.3-201ENST00000615987 467 ntBASIC15.31■□□□□ 0.04
CLDN2P57739 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN2P57739 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN2P57739 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN2P57739 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 HYMAI-201ENST00000635591 3347 ntBASIC15.31■□□□□ 0.04
CLDN2P57739 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 AC127383.1-201ENST00000444697 1800 ntBASIC15.31■□□□□ 0.04
CLDN2P57739 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN2P57739 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN2P57739 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN2P57739 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN2P57739 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN2P57739 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN2P57739 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN2P57739 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN2P57739 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN2P57739 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN2P57739 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLDN2P57739 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN2P57739 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN2P57739 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN2P57739 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLDN2P57739 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.3■□□□□ 0.04
CLDN2P57739 MIR1908-201ENST00000410394 80 ntBASIC15.3■□□□□ 0.04
CLDN2P57739 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLDN2P57739 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN2P57739 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN2P57739 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN2P57739 KRT18P25-201ENST00000508931 1278 ntBASIC15.3■□□□□ 0.04
CLDN2P57739 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN2P57739 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN2P57739 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN2P57739 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms