Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLDN12P56749 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CLDN12P56749 CICP11-201ENST00000434745 2827 ntBASIC13.61□□□□□ -0.23
CLDN12P56749 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN12P56749 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN12P56749 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN12P56749 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN12P56749 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN12P56749 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 AC009947.1-201ENST00000444350 727 ntBASIC13.61□□□□□ -0.23
CLDN12P56749 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN12P56749 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN12P56749 AL450472.2-201ENST00000603663 1156 ntBASIC13.61□□□□□ -0.23
CLDN12P56749 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN12P56749 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN12P56749 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLDN12P56749 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLDN12P56749 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CLDN12P56749 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN12P56749 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN12P56749 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN12P56749 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 AC097359.2-201ENST00000604992 2389 ntBASIC13.6□□□□□ -0.23
CLDN12P56749 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN12P56749 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLDN12P56749 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN12P56749 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN12P56749 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 AC004987.2-201ENST00000395959 1148 ntBASIC13.6□□□□□ -0.23
CLDN12P56749 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.6□□□□□ -0.23
CLDN12P56749 EMBP1-201ENST00000458200 901 ntBASIC13.6□□□□□ -0.23
CLDN12P56749 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN12P56749 UNC93B6-202ENST00000528242 690 ntBASIC13.6□□□□□ -0.23
CLDN12P56749 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN12P56749 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CLDN12P56749 AC025580.3-201ENST00000617932 1424 ntBASIC13.6□□□□□ -0.23
CLDN12P56749 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CLDN12P56749 AC007064.4-201ENST00000637740 555 ntBASIC13.6□□□□□ -0.23
CLDN12P56749 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN12P56749 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN12P56749 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN12P56749 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
CLDN12P56749 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN12P56749 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CLDN12P56749 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN12P56749 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN12P56749 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN12P56749 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CLDN12P56749 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN12P56749 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN12P56749 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN12P56749 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN12P56749 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN12P56749 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN12P56749 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN12P56749 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.59□□□□□ -0.23
CLDN12P56749 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CLDN12P56749 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CLDN12P56749 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN12P56749 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN12P56749 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CLDN12P56749 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN12P56749 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CLDN12P56749 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN12P56749 AC098859.1-201ENST00000502915 1238 ntBASIC13.59□□□□□ -0.23
CLDN12P56749 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.59□□□□□ -0.23
CLDN12P56749 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.59□□□□□ -0.23
CLDN12P56749 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms