Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.95■□□□□ 0.62
PDE1AP54750 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE1AP54750 WASH3P-207ENST00000560956 1394 ntBASIC18.95■□□□□ 0.62
PDE1AP54750 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PDE1AP54750 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PDE1AP54750 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PDE1AP54750 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 SPDYE19P-201ENST00000338590 713 ntBASIC18.95■□□□□ 0.62
PDE1AP54750 MIR770-201ENST00000390219 98 ntBASIC18.95■□□□□ 0.62
PDE1AP54750 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE1AP54750 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 RNA5SP421-201ENST00000516864 134 ntBASIC18.95■□□□□ 0.62
PDE1AP54750 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDE1AP54750 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.95■□□□□ 0.62
PDE1AP54750 REXO1L2P-201ENST00000425429 2069 ntBASIC18.95■□□□□ 0.62
PDE1AP54750 CICP24-201ENST00000605464 2705 ntBASIC18.95■□□□□ 0.62
PDE1AP54750 REXO1L4P-201ENST00000605109 1937 ntBASIC18.95■□□□□ 0.62
PDE1AP54750 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE1AP54750 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PDE1AP54750 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PDE1AP54750 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.95■□□□□ 0.62
PDE1AP54750 AL359258.3-201ENST00000622910 2331 ntBASIC18.95■□□□□ 0.62
PDE1AP54750 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PDE1AP54750 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDE1AP54750 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDE1AP54750 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE1AP54750 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE1AP54750 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE1AP54750 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PDE1AP54750 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
PDE1AP54750 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.94■□□□□ 0.62
PDE1AP54750 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
PDE1AP54750 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE1AP54750 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE1AP54750 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.94■□□□□ 0.62
PDE1AP54750 TPRX2P-201ENST00000535362 881 ntBASIC18.94■□□□□ 0.62
PDE1AP54750 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE1AP54750 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
PDE1AP54750 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
PDE1AP54750 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PDE1AP54750 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE1AP54750 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE1AP54750 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE1AP54750 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.94■□□□□ 0.62
PDE1AP54750 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.94■□□□□ 0.62
PDE1AP54750 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
PDE1AP54750 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.94■□□□□ 0.62
PDE1AP54750 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDE1AP54750 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PDE1AP54750 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.93■□□□□ 0.62
PDE1AP54750 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.93■□□□□ 0.62
PDE1AP54750 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.93■□□□□ 0.62
PDE1AP54750 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDE1AP54750 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms