Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 REXO1L4P-201ENST00000605109 1937 ntBASIC14.19□□□□□ -0.14
HMGA2P52926 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGA2P52926 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGA2P52926 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
HMGA2P52926 AC139749.1-202ENST00000617529 3139 ntBASIC14.19□□□□□ -0.14
HMGA2P52926 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HMGA2P52926 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGA2P52926 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGA2P52926 AC074338.1-201ENST00000416825 156 ntBASIC14.19□□□□□ -0.14
HMGA2P52926 TPM4P1-201ENST00000436100 807 ntBASIC14.19□□□□□ -0.14
HMGA2P52926 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 TIMM8BP1-201ENST00000452384 211 ntBASIC14.19□□□□□ -0.14
HMGA2P52926 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
HMGA2P52926 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGA2P52926 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGA2P52926 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGA2P52926 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGA2P52926 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.19□□□□□ -0.14
HMGA2P52926 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGA2P52926 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGA2P52926 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HMGA2P52926 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGA2P52926 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGA2P52926 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGA2P52926 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGA2P52926 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
HMGA2P52926 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.19□□□□□ -0.14
HMGA2P52926 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.19□□□□□ -0.14
HMGA2P52926 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.19□□□□□ -0.14
HMGA2P52926 AC027601.5-201ENST00000624065 2482 ntBASIC14.19□□□□□ -0.14
HMGA2P52926 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HMGA2P52926 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 AC136759.1-202ENST00000530858 2194 ntBASIC14.19□□□□□ -0.14
HMGA2P52926 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HMGA2P52926 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.18□□□□□ -0.14
HMGA2P52926 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGA2P52926 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HMGA2P52926 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HMGA2P52926 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 AL590627.1-203ENST00000421194 1026 ntBASIC14.18□□□□□ -0.14
HMGA2P52926 MKNK2P1-201ENST00000437526 628 ntBASIC14.18□□□□□ -0.14
HMGA2P52926 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGA2P52926 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGA2P52926 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGA2P52926 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 ALG1L8P-201ENST00000533887 760 ntBASIC14.18□□□□□ -0.14
HMGA2P52926 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HMGA2P52926 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.18□□□□□ -0.14
HMGA2P52926 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HMGA2P52926 C20orf181-201ENST00000623918 480 ntBASIC14.18□□□□□ -0.14
HMGA2P52926 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 Z97205.2-201ENST00000564697 1639 ntBASIC14.18□□□□□ -0.14
HMGA2P52926 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HMGA2P52926 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGA2P52926 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.18□□□□□ -0.14
HMGA2P52926 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGA2P52926 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HMGA2P52926 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.18□□□□□ -0.14
HMGA2P52926 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HMGA2P52926 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGA2P52926 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms