Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.47□□□□□ -0.25
HCFC1P51610 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HCFC1P51610 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.47□□□□□ -0.25
HCFC1P51610 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
HCFC1P51610 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
HCFC1P51610 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HCFC1P51610 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HCFC1P51610 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HCFC1P51610 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HCFC1P51610 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HCFC1P51610 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.46□□□□□ -0.25
HCFC1P51610 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
HCFC1P51610 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
HCFC1P51610 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HCFC1P51610 NKAIN1P1-201ENST00000435754 582 ntBASIC13.46□□□□□ -0.25
HCFC1P51610 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.46□□□□□ -0.25
HCFC1P51610 AC044849.1-201ENST00000519737 1188 ntBASIC13.46□□□□□ -0.25
HCFC1P51610 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.46□□□□□ -0.25
HCFC1P51610 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.46□□□□□ -0.25
HCFC1P51610 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.46□□□□□ -0.25
HCFC1P51610 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.46□□□□□ -0.25
HCFC1P51610 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HCFC1P51610 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.46□□□□□ -0.25
HCFC1P51610 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HCFC1P51610 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HCFC1P51610 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.46□□□□□ -0.25
HCFC1P51610 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HCFC1P51610 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.46□□□□□ -0.25
HCFC1P51610 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HCFC1P51610 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.46□□□□□ -0.25
HCFC1P51610 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.46□□□□□ -0.25
HCFC1P51610 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HCFC1P51610 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HCFC1P51610 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HCFC1P51610 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HCFC1P51610 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HCFC1P51610 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
HCFC1P51610 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.46□□□□□ -0.26
HCFC1P51610 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HCFC1P51610 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HCFC1P51610 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HCFC1P51610 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.46□□□□□ -0.26
HCFC1P51610 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.46□□□□□ -0.26
HCFC1P51610 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.46□□□□□ -0.26
HCFC1P51610 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.46□□□□□ -0.26
HCFC1P51610 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.46□□□□□ -0.26
HCFC1P51610 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.46□□□□□ -0.26
HCFC1P51610 AC106820.3-201ENST00000561653 397 ntBASIC13.46□□□□□ -0.26
HCFC1P51610 RN7SL713P-201ENST00000582127 302 ntBASIC13.46□□□□□ -0.26
HCFC1P51610 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.46□□□□□ -0.26
HCFC1P51610 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.46□□□□□ -0.26
HCFC1P51610 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.46□□□□□ -0.26
HCFC1P51610 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HCFC1P51610 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HCFC1P51610 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.46□□□□□ -0.26
HCFC1P51610 AC148477.4-201ENST00000613430 1793 ntBASIC13.46□□□□□ -0.26
HCFC1P51610 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.45□□□□□ -0.26
HCFC1P51610 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.45□□□□□ -0.26
HCFC1P51610 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.45□□□□□ -0.26
HCFC1P51610 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
HCFC1P51610 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HCFC1P51610 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
HCFC1P51610 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.45□□□□□ -0.26
HCFC1P51610 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.45□□□□□ -0.26
HCFC1P51610 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
HCFC1P51610 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 KLF2P2-201ENST00000416807 1039 ntBASIC13.45□□□□□ -0.26
HCFC1P51610 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.45□□□□□ -0.26
HCFC1P51610 GHSR-202ENST00000427970 912 ntBASIC13.45□□□□□ -0.26
HCFC1P51610 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.45□□□□□ -0.26
HCFC1P51610 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.45□□□□□ -0.26
HCFC1P51610 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.45□□□□□ -0.26
HCFC1P51610 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 AC020914.3-201ENST00000594712 304 ntBASIC13.45□□□□□ -0.26
HCFC1P51610 AL451050.2-201ENST00000606967 682 ntBASIC13.45□□□□□ -0.26
HCFC1P51610 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.45□□□□□ -0.26
HCFC1P51610 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.45□□□□□ -0.26
HCFC1P51610 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HCFC1P51610 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.44□□□□□ -0.26
HCFC1P51610 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HCFC1P51610 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
HCFC1P51610 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms