Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5CP51148 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB5CP51148 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
RAB5CP51148 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5CP51148 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.58□□□□□ -0.4
RAB5CP51148 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB5CP51148 GCSHP5-201ENST00000443090 522 ntBASIC12.58□□□□□ -0.4
RAB5CP51148 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 AL355075.4-201ENST00000554988 638 ntBASIC12.58□□□□□ -0.4
RAB5CP51148 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.58□□□□□ -0.4
RAB5CP51148 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 METTL23-204ENST00000586752 904 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5CP51148 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.58□□□□□ -0.4
RAB5CP51148 AC091076.1-201ENST00000610741 619 ntBASIC12.58□□□□□ -0.4
RAB5CP51148 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
RAB5CP51148 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.58□□□□□ -0.4
RAB5CP51148 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB5CP51148 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.58□□□□□ -0.4
RAB5CP51148 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
RAB5CP51148 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
RAB5CP51148 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
RAB5CP51148 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
RAB5CP51148 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.57□□□□□ -0.4
RAB5CP51148 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB5CP51148 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB5CP51148 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
RAB5CP51148 AC093724.1-201ENST00000448659 1027 ntBASIC12.57□□□□□ -0.4
RAB5CP51148 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.57□□□□□ -0.4
RAB5CP51148 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB5CP51148 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 MIR4321-201ENST00000592276 80 ntBASIC12.57□□□□□ -0.4
RAB5CP51148 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 AL139424.1-201ENST00000607572 797 ntBASIC12.57□□□□□ -0.4
RAB5CP51148 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
RAB5CP51148 AC011558.1-201ENST00000623459 338 ntBASIC12.57□□□□□ -0.4
RAB5CP51148 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.57□□□□□ -0.4
RAB5CP51148 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB5CP51148 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.57□□□□□ -0.4
RAB5CP51148 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 AC131902.2-201ENST00000566892 2172 ntBASIC12.57□□□□□ -0.4
RAB5CP51148 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.57□□□□□ -0.4
RAB5CP51148 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
RAB5CP51148 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.57□□□□□ -0.4
RAB5CP51148 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
RAB5CP51148 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.56□□□□□ -0.4
RAB5CP51148 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.56□□□□□ -0.4
RAB5CP51148 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
RAB5CP51148 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
RAB5CP51148 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms