Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.22□□□□□ -0.13
CENPAP49450 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.22□□□□□ -0.13
CENPAP49450 BNIP3P1-202ENST00000550043 1585 ntBASIC14.22□□□□□ -0.13
CENPAP49450 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.22□□□□□ -0.13
CENPAP49450 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 MIR193BHG-211ENST00000641433 5365 ntBASIC14.22□□□□□ -0.13
CENPAP49450 AL031595.1-201ENST00000623969 4709 ntBASIC14.22□□□□□ -0.13
CENPAP49450 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.22□□□□□ -0.13
CENPAP49450 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.22□□□□□ -0.13
CENPAP49450 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.22□□□□□ -0.13
CENPAP49450 SPCS2P4-201ENST00000436160 681 ntBASIC14.22□□□□□ -0.13
CENPAP49450 AL592309.1-201ENST00000443127 649 ntBASIC14.22□□□□□ -0.13
CENPAP49450 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 AC243562.1-201ENST00000560672 389 ntBASIC14.22□□□□□ -0.13
CENPAP49450 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.22□□□□□ -0.13
CENPAP49450 AC026979.3-201ENST00000607315 403 ntBASIC14.22□□□□□ -0.13
CENPAP49450 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CENPAP49450 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.22□□□□□ -0.13
CENPAP49450 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.22□□□□□ -0.13
CENPAP49450 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.22□□□□□ -0.13
CENPAP49450 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.22□□□□□ -0.13
CENPAP49450 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CENPAP49450 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CENPAP49450 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 FOXO1B-201ENST00000504678 1527 ntBASIC14.21□□□□□ -0.13
CENPAP49450 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CENPAP49450 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 AC105250.1-201ENST00000509378 2057 ntBASIC14.21□□□□□ -0.13
CENPAP49450 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.21□□□□□ -0.13
CENPAP49450 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CENPAP49450 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.21□□□□□ -0.13
CENPAP49450 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 HLA-H-201ENST00000383620 1096 ntBASIC14.21□□□□□ -0.13
CENPAP49450 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.21□□□□□ -0.13
CENPAP49450 AP000842.3-202ENST00000569238 1080 ntBASIC14.21□□□□□ -0.13
CENPAP49450 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
CENPAP49450 C20orf181-201ENST00000623918 480 ntBASIC14.21□□□□□ -0.13
CENPAP49450 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CENPAP49450 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 REXO1L1P-202ENST00000608646 1974 ntBASIC14.21□□□□□ -0.13
CENPAP49450 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CENPAP49450 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.21□□□□□ -0.13
CENPAP49450 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.21□□□□□ -0.13
CENPAP49450 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CENPAP49450 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms