Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
KRT6CP48668 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT6CP48668 HIST3H2BA-201ENST00000436555 524 ntBASIC15.16■□□□□ 0.02
KRT6CP48668 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT6CP48668 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.16■□□□□ 0.02
KRT6CP48668 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT6CP48668 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.16■□□□□ 0.02
KRT6CP48668 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
KRT6CP48668 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.16■□□□□ 0.02
KRT6CP48668 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT6CP48668 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.16■□□□□ 0.02
KRT6CP48668 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
KRT6CP48668 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
KRT6CP48668 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
KRT6CP48668 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6CP48668 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6CP48668 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6CP48668 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6CP48668 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6CP48668 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6CP48668 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6CP48668 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6CP48668 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 MIR4453-201ENST00000584019 89 ntBASIC15.15■□□□□ 0.02
KRT6CP48668 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6CP48668 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.15■□□□□ 0.02
KRT6CP48668 AP001059.3-201ENST00000619053 235 ntBASIC15.15■□□□□ 0.02
KRT6CP48668 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.15■□□□□ 0.02
KRT6CP48668 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.15■□□□□ 0.02
KRT6CP48668 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
KRT6CP48668 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6CP48668 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6CP48668 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT6CP48668 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT6CP48668 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
KRT6CP48668 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
KRT6CP48668 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
KRT6CP48668 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6CP48668 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6CP48668 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
KRT6CP48668 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms