Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SSR1P43307 AC009090.5-201ENST00000624886 2285 ntBASIC16.67■□□□□ 0.26
SSR1P43307 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.67■□□□□ 0.26
SSR1P43307 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SSR1P43307 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SSR1P43307 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.67■□□□□ 0.26
SSR1P43307 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 AC138035.3-201ENST00000622706 2791 ntBASIC16.66■□□□□ 0.26
SSR1P43307 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.66■□□□□ 0.26
SSR1P43307 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SSR1P43307 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.66■□□□□ 0.26
SSR1P43307 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SSR1P43307 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSR1P43307 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.66■□□□□ 0.26
SSR1P43307 AL627223.1-201ENST00000416693 442 ntBASIC16.66■□□□□ 0.26
SSR1P43307 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
SSR1P43307 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.66■□□□□ 0.26
SSR1P43307 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.66■□□□□ 0.26
SSR1P43307 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.66■□□□□ 0.26
SSR1P43307 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
SSR1P43307 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.66■□□□□ 0.26
SSR1P43307 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.66■□□□□ 0.26
SSR1P43307 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SSR1P43307 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.66■□□□□ 0.26
SSR1P43307 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.66■□□□□ 0.26
SSR1P43307 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SSR1P43307 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 AL513210.1-201ENST00000629608 234 ntBASIC16.66■□□□□ 0.26
SSR1P43307 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.66■□□□□ 0.26
SSR1P43307 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.66■□□□□ 0.26
SSR1P43307 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSR1P43307 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SSR1P43307 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSR1P43307 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSR1P43307 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SSR1P43307 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SSR1P43307 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.65■□□□□ 0.26
SSR1P43307 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.65■□□□□ 0.26
SSR1P43307 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.65■□□□□ 0.26
SSR1P43307 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SSR1P43307 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.65■□□□□ 0.26
SSR1P43307 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.65■□□□□ 0.26
SSR1P43307 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.65■□□□□ 0.26
SSR1P43307 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.65■□□□□ 0.26
SSR1P43307 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.65■□□□□ 0.26
SSR1P43307 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.65■□□□□ 0.26
SSR1P43307 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.65■□□□□ 0.26
SSR1P43307 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.65■□□□□ 0.26
SSR1P43307 AC004835.2-201ENST00000603762 682 ntBASIC16.65■□□□□ 0.26
SSR1P43307 AC018529.1-201ENST00000613063 361 ntBASIC16.65■□□□□ 0.26
SSR1P43307 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.65■□□□□ 0.26
SSR1P43307 AC084121.4-201ENST00000641598 221 ntBASIC16.65■□□□□ 0.26
SSR1P43307 AF228730.8-201ENST00000642140 221 ntBASIC16.65■□□□□ 0.26
SSR1P43307 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SSR1P43307 FAM45BP-202ENST00000592932 1624 ntBASIC16.65■□□□□ 0.26
SSR1P43307 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.65■□□□□ 0.26
SSR1P43307 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SSR1P43307 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SSR1P43307 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SSR1P43307 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSR1P43307 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.65■□□□□ 0.26
SSR1P43307 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms