Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC1A3P43003 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SLC1A3P43003 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SLC1A3P43003 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.37□□□□□ -0.11
SLC1A3P43003 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.37□□□□□ -0.11
SLC1A3P43003 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC1A3P43003 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.37□□□□□ -0.11
SLC1A3P43003 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.37□□□□□ -0.11
SLC1A3P43003 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.37□□□□□ -0.11
SLC1A3P43003 AC051619.7-201ENST00000568314 623 ntBASIC14.37□□□□□ -0.11
SLC1A3P43003 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SLC1A3P43003 SNX18-202ENST00000343017 3140 ntBASIC14.37□□□□□ -0.11
SLC1A3P43003 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SLC1A3P43003 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SLC1A3P43003 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.37□□□□□ -0.11
SLC1A3P43003 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SLC1A3P43003 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SLC1A3P43003 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A3P43003 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A3P43003 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SLC1A3P43003 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
SLC1A3P43003 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SLC1A3P43003 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC1A3P43003 AC107890.1-201ENST00000422478 521 ntBASIC14.36□□□□□ -0.11
SLC1A3P43003 AL645939.2-201ENST00000427340 991 ntBASIC14.36□□□□□ -0.11
SLC1A3P43003 FAM86GP-201ENST00000448322 971 ntBASIC14.36□□□□□ -0.11
SLC1A3P43003 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A3P43003 AC069120.2-201ENST00000524091 540 ntBASIC14.36□□□□□ -0.11
SLC1A3P43003 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC1A3P43003 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC1A3P43003 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.36□□□□□ -0.11
SLC1A3P43003 AC140878.1-201ENST00000565277 250 ntBASIC14.36□□□□□ -0.11
SLC1A3P43003 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.36□□□□□ -0.11
SLC1A3P43003 AL138828.2-201ENST00000615812 383 ntBASIC14.36□□□□□ -0.11
SLC1A3P43003 SPDYE12P-201ENST00000618416 771 ntBASIC14.36□□□□□ -0.11
SLC1A3P43003 AC093028.1-201ENST00000622998 982 ntBASIC14.36□□□□□ -0.11
SLC1A3P43003 AC073592.8-201ENST00000624126 511 ntBASIC14.36□□□□□ -0.11
SLC1A3P43003 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A3P43003 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SLC1A3P43003 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SLC1A3P43003 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A3P43003 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.36□□□□□ -0.11
SLC1A3P43003 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SLC1A3P43003 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SLC1A3P43003 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SLC1A3P43003 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms